My "registered" permissions taking priority over "administrative" permissions

How do you set which takes precedence?

Right now I have admin permissions set to "allow all" but my admin account also has "registered" permissions that are overwriting them(?)

This is based on the results of "analyze permissions"
Thanks Maru; There are so many guides and FAQ's out there. It will take me a while to absorb them all :)

I understand now and it makes complete sense.