Where have you added your track code?
Add it to the footer or PAGE_CONTAINER template or use the template hooks(because there's IMHO no need to edit the templates... it's better because of the upgrades ).
I only had it on the body of the index page because I didn't know where to append to the others...
I added it the the PAGE_CONTAINER right before the</body> tag
I will let you know if this works ;o)
Thanks for your help!